Algorithms in Bioinformatics

MEGAN6 - Metagenome Analyzer

Microbiome analysis using a single application

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MEGAN6 is a comprehensive toolbox for interactively analyzing microbiome data. All the interactive tools you need in one application.

  • Taxonomic analysis using the NCBI taxonomy or a customized taxonomy such as SILVA
  • Functional analysis using InterPro2GO, SEED, eggNOG or KEGG
  • Bar charts, word clouds, Voronoi tree maps and many other charts
  • PCoA, clustering and networks
  • Supports metadata
  • MEGAN parses many different types of input

Publications

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DIAMOND+MEGAN pipeline