The members of the systems biology group

Scientific Lead

Dr. Andreas Dräger

Assistant Professor of Systems Biology
Bioinformatician
Sand 14 ⋅ Office C108
72076 Tübingen
Germany

 +49 7071 29-70459
 +49-7071-29-5152
draegerspam prevention@informatik.uni-tuebingen.de

Office Hours

Mondays 10-12 a.m.
Further information

 

Postdoctoral Researchers

Dr. Reihaneh Mostolizadeh

Lecturer in Systems Biology
Mathematician
Sand 14 · Office C106
72076 Tübingen
Germany

 +49 7071 29-70488
 +49-7071-29-5152
mostolispam prevention@informatik.uni-tuebingen.de

Office Hours

By arrangement

Further information

Research Assistants

Alina Renz

MSc in Bioinformatics
Sand 14 ⋅ Office C106

72076 Tübingen
Germany

 +49-7071-29-70488
 +49-7071-29-5152
renzspam prevention@informatik.uni-tuebingen.de

 
Thesis

Modeling of potentially virulence-associated metabolic pathways in Pseudomonas aeruginosa PA14 and experimental verification
Graduation: December 2018

Office Hours

By arrangement

Further information

Student Assistants

Eike Pertuch

BSc in Bioinformatics

Participation:
Since April 2020

Thesis

Modelling and Visualization of specific resistance mechanisms in Pseudomonas aeruginosa

Graduation: September 2019
 

 

 

Nantia Leonidou

Master in Bioinformatics
nantia.leonidouspam prevention@uni-tuebingen.de

Assistance: since March 2020

 
Further information

GitHub profile

 

 

Thomas J. Zajac

BSc in Bioinformatics

Participation:

  • May 2016 to February 2018
  • Since November 2019
Further information

GitHub profile

 

 

Onur Özel

Major: Computer Science

Participation:
Since November 2019

Further information

GitHub profile

 

Master Students

Martina Feierabend

Major: Bioinformatics

Thesis

Towards a Consensus Genome-scale Reconstruction of Corynebacterium glutamicum ATCC 13032

Expected completion
October 2020

 

Tanja Urz

Subject: Molecular Medicine

Research Project

Reconstruction of Corynebacterium striatum 

Expected completion
May 2020

 

Constantin Holzapfel

Major: Bioinformatics

Thesis

Visual analysis of flux sampling simulations based on extracellular metabolomic measurements

Expected completion
September 2020

Bachelor Students

Elisabeth Fritze

Major: Bioinformatics

Thesis

Automating the Assignment of SBO-Terms

Expected completion:
September 2020

Further information

Github profile

Anastasiia Grekova

Major: Bioinformatics

Thesis

Reconstruction and Analysis of Staphylococcus epidermidis

Expected completion:
May 2020

Further information

GitHub profile

Ebru Cobanoglu

External Students

Google Summer of Code 2019

Google Summer of Code and the NRNB Academy repeatedly fund several of the research group's software products. These programs allow international students to join the team and actively participate in the development of open source software.

Google Summer of Code 2020

Hemil Panchiwala

Subject: Computer Science and Engineering (B. Tech.)

Affiliation: Indian Institute of Technology, Roorkee, India

Project

Simulation of systems biology models in Java: support for new features

Participation: May to September 2020

 

Mentors

Jun.-Prof. Dr. Andreas Dräger, Dr. Matthias König, Mykola Zakharchuk, and Shalin Shah

Further information

Projekt blog
GitHub profile
LinkedIn profile
Twitter channel
Medium link

Hemant Yadav

Major: Computer Science and Technology (B. Tech)

Affiliation: Indian Institute of Technology, Roorkee, India

Project

Implementation of SBML-JSON converter and SBML-JSON scheme

Contact: hemantspam prevention@cs.iitr.ac.in

Participation: May to September 2020

Mentoren

Jun.-Prof. Dr. Andreas Dräger, Dr. Matthias König, Lucian P. Smith, and Sarah M. Keating

Further Information

Project blog
GitHub profile
LinkedIn profile
Twitter channel
Medium link