Uni-Tübingen

Publications

2020

  • Abramov, S., Tejada, J., Grimm, L., Schaedler, F., Bulaev, A.G., Tomaszewski, E., Byrne, J., Straub, D., Thorwarth, H., Amils, R., Kleindienst, S., Kappler, A. (2020): Role of biogenic Fe(III) minerals as a sink and carrier of heavy metals in the Rio Tinto river, Spain. Sci Total Environ 718: 137294.
  • Blackwell, N., Bryce, C., Straub, D., Kappler, A., Kleindienst, S. (2020): Genomics insights into two novel Zetaproteobacteria Fe(II)-oxidizing isolates reveal lifestyle adaption to coastal marine sediments. Appl. Environ Microbio., doi: 10.1128/AEM.01160-20.
  • Bugsel, B., Zwiener, C. (2020): LC-MS screeining of poly- and perfluoroalkyl substances in contaminated soil by Kendrick mass analysis. Anal. Bioanal. Chem. 412: 4797-4805, doi: 10.1007/s00216-019-02358-0.
  • D'Affonseca, F.M., Finkel, M., Cirpka, O.A. (2020): Combining implicit geological modeling, field surveys, and hyfrogeological modeling to describe groundwater flow in a karst aquirfer. Hydrogeology Journal, in press.
  • D. Erdal, O.A. Cirpka (2020): Technical Note: Improved sampling of behavioral subsurface flow model parameters using active subspaces. Hydrol. Earth Sys. Sci., in press.
  • Erdal, D., Xiao, S., Nowak, W., Cirpka, O.A. (2020): Sampling behavioral model parameters for ensemble-based sensitivity analysis using Gaussian Process Emulation and Active Subspaces. Stoch. Environ. Res. Risk Ass., in press.
  • Finkel, M., Baur, A., Weber, T.K.D., Osenbrück, K., Rügner, H., Leven, C., Schwientek, M., Schlögl, J., Hahn, U., Streck, T., Cirpka, O.A., Walter, T., Grathwohl, P. (2020): Managing collaborative research data for integrated, interdisciplinary environmental research. Earth Sci Inform: 1-14, doi: 10.1007/s12145-020-00441-0.
  • Glaser, C., Zarfl. C., Werneburg, M., Böckmann, M., Zwiener, C., Schwientek, M. (2020): Temporal and spatial variable in-stream attenuation of selected pharmaceuticals. Sci. Total Environ. 741: 139514.
  • Glaser, C., Zarfl, C., Rügner, H., Lewis, A., Schwientek, M. (2020): Analysing particle-associated pollutant transport to identify in-stream sediment processes during a high flow event. Water 12(1794): 1-16.
  • Glodowska, M., Stopelli, E., Schneider, M., Lightfoot, A., Rathi, B., Straub, D., Patzner, M., Berg, M., Vu, D., Kleindienst, S., Kappler, A. (2020): Role of in-situ natural organic matter in mobilizing As during microbial reduction of Fe(III)-mineral-bearing aquifer sediments from Hanoi (Vietman) Environ Sci Technol. 54,7: 4149-4159, doi: 10.1021/acs.est.9b07183.
  • Heidgen, S., Marinova, E., Krauß, R., Nelle, O., Ebner, M., Märkle, T., Miranda, T., Bofinger, J., Klingler, S., Junginger, A. (2020): Palaeoenvironment and potential resources for early Holocene subsistence in the Ammer River Valley (Germany) based on palaeoecological and bioarchaeological evidence. Quaternary International, in press, doi: 10.1016/j.quaint.2020.05.038.
  • Höge, M., Guthke, A. Nowak, W. (2020): Bayesian model weighting: The many faces of model averaging. Water 12(2): 309, doi: 10.3390/w12020309.
  • Klingler, S., Leven, C., Cirpka, O.A., Dietrich, P. (2020): Anomaly effect-driven optimization of direct-current geoelectric mapping surveys in large areas. Journal of Applied Geophysics 176, doi: 10.1016/j.jappgeo.2020.104002.
  • Li,S., Braun, J.C., Buchner, D., Haderlein, S.B. (2020): Denitrifier method for nitrite removal in electrochemical analysis of the electron accepting capacity of humic sustances. Anal. Chem. 92(1): 616-621.
  • Li, S., Kappler, A., Zhu, Y., Haderlein, S.B. (2020): Mediated electrochemical analysis as emerging tool to unravel links between microbial redox cycling of natural organic matter and anoxic nitrogen cycling. Earch Sc. Rev. (208), doi: 10.1016/j.earscirev.2020.103281.
  • Lihl, C., Heckel, B., Grzybkowska, A., Dybala-Defratyka, A., Ponsin, V., Torrentó, C., Hunkeler, D., Elsner, M. (2020): Compound-specific chlorine isotope fractionation in biodegradation of atrazine. Environ. Sci. Processes Impacts 22: 792-801, doi: doi: 10.1039/c9em00503j.
  • Liu, Y., Zarfl, C., Basu, N., Cirpka, O.A. (2020): Modeling the fate of pharmaceuticals in a fourth-order river under competing assumptions of transient storage. Water Resour. Res. 56(3), e2019WR026100, doi: 10.1029/2019WR026100.
  • Lutz, S.R., Trauth, N., Musolff, A., Van Breukelen, B.M., Knöller, K., Fleckenstein, J.H. (2020): How important is denitrification in riparian zones? Combining end-member mixing and isotope modeling to quantify nitrate removal from riparian groundwater. Water Resources Research 56: e2019WR025528, doi: 10.1029/2019WR025528.
  • Maier, R., Gonzalez-Nicolas, A., Leven, C., Nowak, W., Cirpka, O.A. (2020): Joint optimization of measurement and modeling strategies with application to radial flow in statified aquifers. Water Resour. Res. (in press), doi: 10.1029/2019WR026872.
  • Martin, P. R.; Buchner, D.; Jochmann, M. A.; Haderlein, S. B. (2020): Stable carbon isotope analysis of polyphosphonate complexing agents by anion chromatography coupled to isotope ratio mass spectrometry: method development and application. Anal. Bioanal. Chem.; 1-9, doi: 10.1007/s00216-019-02251-w.
  • Martin, S., Klingler, S., Dietrich, P., Leven, C., Cirpka, O.A. (2020): Structural controls on the hydrogeological functioning of a floodplain. Hydrogeology Journal, in press.
  • Melsbach, A., Torrentó, C., Ponsin, V., Bolotin, J., Lachat, L., Prasuhn, V., Hofstetter, T.B., Hunkeler, D., Elsner, M. (2020): Dual-Element Isotope Analysis of deshenylchloridazon to investigate its environmental fate in a systematic field study: A long-term lysimeter experiment. Environ. Sci. Technol., doi: 10.1021/acs.est.9b04606.
  • Müller, M.E., Werneburg, M., Glaser, C., Schwientek, M., Zarfl, C., Escher, B.I., Zwiener, C. (2020): Influence of emission sources and tributaries on the spatial and temporal patterns of micropollutant mixtures and associated effects in a small river. Environ. Toxicol. Chem. 39(7): 1382-1391, doi: 10.002/etc.4726.
  • Nowak, K.M., Miltner, A., Poll, C., Kandeler, E., Streck, T., Pagel, H. (2020): Plant litter enhances degradation of the herbicide MCPA and increases formation of biogenic non-extractable residues in soil. Environ Int 142105867, doi: 10.1016/j.envint.2020.105867.     
  • Pagel, H., Kriesche, B., Uksa, M., Poll, C., Kandeler, E., Schmidt, V., Streck, T. (2020): Spatial control of carbon dynamics in soil by microbial decomposer communities. Front. Environ. Sci. 8, doi: 10.3389/fenvs.2020.00002.
  • Riedel, T., Weber, T.K.D. (2020): Review: The influence of global change on Europe's water cycle and groundwater recharge. Hydrogeology Journal, doi: 10.1007/s10040-020-02165-3
  • Sanchez-León, E., Erdal, D., Leven, C., Cirpka, O.A. (2020): Comparison of two Ensemble-Kalman based methods for estimationg aquifer parameters from virtual 2-D hydraulic and tracer tomographic test. Gesosci. 10(7): 276, doi: 10.3390/geosciences10070276.
  • Selzer, P., Cirpka, O.A. (2020): Postprocessing of standard Finite-Element velocity fields for accurate particle tracking applied to groundwater flow. Computational Geosciences, in press, doi: 10.1007/s10596-020-09969-y.
  • Streck, T., Weber, T.K.D. (2020): Analytical expressions for noncapillary soil water retention based on popular capillary retention models. Vadose Zone j:, 19: e20042, doi: 10.1002/vzj2.20042.
  • Subdiaga, E., Harir, M., Orsetti, S., Hertkorn, N., Schmitt-Kopplin, P., Haderlein S.B. (2020): Preferential sorption of tannins at aluminum oxide affects the electron exchange capacities of dissolved and sorbed humic acid fractions. Environ Sci Technol 54(3): 1837-1847.
  • Utom, A.U., Werban, U., Leven, C., Müller, C., Knöller, K., Vogt, C., Dietrich, P. (2020): Groundwater nitrification and denitrification are not always strictly aerobic and anaerobic processes, respectively: an assessment of dual-nitrate isotopic and chemical evidence in a stratified alluvial aquifer. Biogeochemistry, doi: 10.1007/s10533-020-00637-y.
  • Weber, T.K.D., Finkel, M., da Conceicáo Goncalves, M., Vereecken, H., Diamantopoulos, E. (2020): Pedotransfer function for the Brunswick soil hydraulic property model and comparison to the von Genuchten-Mualem model. Water Resour. Res. in press, doi: 10.1029/2019WR026820.
  • Wimmer, B., Pattky, M., Gulu Zada, L., Meixner, M., Haderlein, S.B., Zimmermann, H.-P., Huhn, C. (2020): Capillary electrophoresis-mass spectrometry for the direct analysis of glyphosate: method development and application to beer beverages and environmental studies. Anal. Bioanal. Chem., 1-17, doi: 10.1007/s00216-020-02751-0.
  • Wirsching J, Pagel H, Ditterich F, Uksa M., Werneburg M., Zwiener C., Berner D., Kandeler E., Poll C. (2020): Biodegradation of pesticides at the limit: kinetics and microbial substrate use at low concentrations. Front Microbiol 11: 2107, doi: https://doi.org/10.3389/fmicb.2020.0210
  • Zhu, B., Wang, Z., Kanaparthi, D., Kublik, S., Ge, T., Casper, P., Schloter, M., Lueders, T. (2020): Long-read amplicon sequencing of nitric oxide dismutase (Nod) genes reveal diverse oxygencic denitrifiers in agricultural soils and lake sediments. Microbial Ecology doi: 10.1007/s00248-020-01482-0.
  • Zhu, B., Friedrich, B., Wang, Z., Táncsics, A., Lueders, T. (2020): Availability of nitrite and nitrate as electron acceptors modulates anaerobic toluene-degrading communities in aquifer sediments. Front Microbiol, in press.
Related papers
  • Spahr, S., Teixido, M., Sedlak, D.L., Luthy, R.G. (2020): Hydrophilic trace organic contaminants in urban stormwater: occurrence, toxicological relevance, and the need to enhance green strormwater infrastructure. Environ. Sci. Water Res. Technol. 6: 15-44.

2019

  • Chow, R., Bennett, J., Dugge, J., Wöhling, T., Nowak, W. (2019): Evaluating subsurface parameterization to simulate hyporheic exchange: The Steinlach River Test Site. Groundwater 58(1): 93-109, doi: 10.1111/gwat.12884.
  • Erdal, D., Baroni, G., Sanchez-Léon, E., Cirpka, O.A. (2019): The value of simplified models for spin up of complex models with an application to subsurface hydrology. Computers and Geosciences 126: 62-72, doi: 10.1016/j.cageo.2019.01.014.
  • Erdal, D., Cirpka, O.A. (2019): Global sensitivity analysis and adaptive stochastic sampling of a subsurface-flow model using active subspaces. Hydrol. Earth Syst. Sci. 23: 3787-3805, https://www.hydrol-earth-syst-sci.net/23/3787/2019/.
  • Eshonkulov, R., Poyda, A., Ingwersen, J., Wizemann, H.-D., Weber, T.K.D., Kremer, P., Högy, P., Pulatov, A., Streck, T. (2019): Evaluating multi-year, multi-site data on the energy balance closure of eddy-covariance flux measurements at cropland sites in southwestern Germany. Biogeosciences 16: 521-540, doi: 10.5194/bg-16-521-2019.
  • Glaser, C., Schwientek, M., Zarfl, C. (2019): Designing field-based investigations of organic micropollutant fate in rivers. Environ. Sci. Pollut. Res. 28: 28633-28649, doi: 10.1007/s11356-019-06058-1.
  • Guillet, G., Knapp, J.L.A., Merel,S., Cirpka, O.A., Grathwohl, P., Zwiener, C., Schwientek, M. (2019): Fate of wastewater contaminants in rivers: Using conservative-tracer based transfer functions to assess reactive transport. Science of the Total Environment 656: 1250-1260, doi: 10.1016/j.scitotenv.2018.11.379.
  • Höge, M., Guthke, A., Nowak, W. (2019): The hydrologist's guide to Bayesian model selection, averaging and combination. J. Hydrol. 572: 96-107, doi: 10.1016/j.jhydrol.2019.01.072.
  • Knapp, J.L.A., Osenbrück, K., Brennwald, M.S., Cirpka, O.A. (2019): In-situ mass spectrometry improves the estimation of stream reaeration from gas-tracer tests. Sci. Total Environ. 655: 1062-1070, doi: 10.1016/j.scitotenv.2018.11.300.
  • Lesch, M., Thiele, B., Streck, T., Grathwohl, P. (2019): In situ Monitoring von frisch applizierten Pflanzenschutzmitteln. Mitt Umweltchem Ökotox 25,2: 35-38.
  • Liu, Y., Zarfl, C., Basu, N., Cirpka, O.A. (2019): Turnover and legacy of sediment-associated PAH in a baseflow-dominated river. Sci. Total Environ. 671: 754-764.
  • Loschko, M., Wöhling, T., Rudolph, D.L. Cirpka, O.A. (2019): An electron-balance based approach to predict the decreasing denitrification potential of an aquifer. Groundwater 57 (6): 925-939, doi:10.1111/gwat.12876.
  • Marozava, S., Meyer, A. H., Pérez-de-Mora, A. Gharasoo, M., Zhuo, L., Wang, Z., Cirpka, O.A., Meckenstock, R. U., Elsner, M. (2019): Mass transfer limitation during slow anaerobic biodegradation of 2-methylnaphthalene. Environ.Sci. Technol. 53: 9481-9490, doi: 10.1021/acs.est.9b01152.
  • Marschmann, G.L., Pagel, H., Kügler, P., Streck, T. (2019): Equifinality, sloppiness and emergent structures of mechanistic soil biogeochemical models.Environmental Modelling & Software. Vol. 122, doi: 10.1016/j.envsoft.2019.104518.
  • Motavita, D.F., Chow, R., Guthke, A., Nowak, W. (2019): The Comprehensive Differential Split-Sample Test: A stress-test for hydrological model robustness under climate variability. J. Hydrol. 573: 501-515, doi: 10.1016/j.jhydrol.2019.03.054.
  • Müller, M.E., Vikstrom, S., König, M.,Schlichting, R., Zarfl, C., Zwiener, C., Escher, B.I. (2019): Mitochondrial toxicity of selected micropollutants, their mixtures, and surface water samples measured by the oxygen consumption rate in cells. Environ. Tox. and Chem. 5: 1000-1011, https://setac.onlinelibrary.wiley.com/doi/epdf/10.1002/etc.4396.
  • Straub, D., Blackwell, N., Langarica Fuentes, A., Peltzer, A., Nahnsen, S., Kleindienst, S. (2019): Interpretations of microbial community studies are biased by the selected 16S rRNA gene amplicon sequencing pipeline. bioRxiv, doi: 10.1101/2019.12.17.880468.
  • Subdiaga, E., Orsetti, S.Haderlein, S.B. (2019): Effects of sorption on redox properties of natural orgaic matter. Environ. Sci. and Technol. 53(24): 14319-14328.
  • Utom, A.U., Werban, U., Leven, C., Müller. C., Dietrich, P. (2019): Adaptive observation-based subsurface conceptual site modeling framework combining interdisciplinary methodologies: a case study on advancing the understanding of a groundwater nitrate plume occurrence. Environm. Science and Pollution Research 26: 15754-15766, doi: 10.1007/s11356-019-05048-7.
  • Weber, T.K.D., Durner, W., Streck, T., Diamantopoulos, E. (2019): A modular framework for modeling unsaturated soil hydraulic properties over the full moisture range. Water Resources Research 55, doi: 10.1029/2018WR024584.
Related papers
  • Neidhardt, H., Achten, F., Kern, S., Schwientek, M., Oelmann, Y. (2019): Phosphorus pool composition in soils and sediments of transitional ecotones under the influence of agriculture. Journal of Environmental Quality 48 (5): 1325-1335. doi:10.2134/jeq2019.01.0012.

2018

  • Gauglitz, G., Wimmer, B., Melzer, T., Huhn, C. (2018): Glyphosate analysis using sensors and electromigration separation techniques as alternatives to gas or liquid chromatography. Anal. Bioanal Chem 410: 725-746, doi:10.1007/s00216-017-0679-x.
  • Grathwohl, P. und Rügner, H. (2018): Das Schadstoff-Forschungsprojekt CAMPOS. TÜBINGER BLÄTTER 2018.
  • Höge, M., Wöhling, T., Nowak, W. (2018): A primer for model selection: The decisive role of model complexity. Water Resources Research 54(3): 1688-1715, doi: 10.1002/2017WR021902.
  • Huhn, C. (2018): More and enhanced glyphosate analysis is needed. Anal. Bioanl. Chem 410: 3041-3045, doi:10.1007/s00216-018-1000-3.
  • Knapp, J.L.A., Cirpka, O.A. (2018): A critical assessment of relating resazurin-resorufin experiments to reach-scale metabolism in lowland streams. J. Geophys. Res. Biogeosci. 123(12): 3538-3555, doi: 10.1029/2018JG004797.
  • Liu, Y., Zarfl, C., Basu, N.B., Schwientek, M., Cirpka, O. A. (2018): Contributions of catchment and in-stream processes to suspended sediment transport in a dominantly groundwater-fed catchment. Hydrol. Earth Syst. Sci., 22: 3903-3921, doi:10.5194/hess-22-3903-2018.
  • Loschko, M., Wöhling, T., Rudolph, D.L., Cirpka, O.A. (2018): Accounting for the Decreasing Reaction Potential of heterogeneous aquifers in a Stochastic Framework of Aquifer-Scale Reactive Transport. Water Resour. Res. 54(1): 442-463, doi:10.1002/2017WR021645.
  • Müller, M.E., Escher, B.I., Schwientek, M., Werneburg, M., Zarfl, C., Zwiener, C. (2018): Combining in vitro reporter gene bioassays with chemical analysis to assess changes in the water quality along the Ammer River, Southwestern Germany. Environ. Sci. Eur. 30: 20, doi:10.1186/s12302-018-0148-y.
  • Pinheiro, M., Pagel, H., Poll, C., Ditterich, F., Garnier, P., Streck, T., Kandeler, E., Gonod, L. V. (2018): Water flow drives small scale biogeography of pesticides and bacterial pesticide degraders - A microcosm study using 2,4-D as a model compound. Soil Biol. and Biochem. 127: 137-147, doi:10.1016/j.soilbio.2018.09.024.
  • Schaedler, F., Kappler, A., Schmidt, C. (2018): A revised iron extraction protocol for environmental samples enriched in nitrate, nitrile and carbonate. Geomicrobio. J. 35: 23-30.
  • Visser, A.-N. (2018): Nitrogen and oxygen Isotope Fractionation Systematics: Implications for Denitrification Mechanismus in Laboratory Batch Cultures & a Groundwater Microbial Community. Dissertation, Tübingen.
Related papers
  • Nasrabadi, T., Rügner, H., Schwientek, M., Bennett, J., Valipour, S.F., Grathwohl, P. (2018): Bulk metal concentrations versus total suspended solids in rivers: Time-invariant & catchment-specific relationships. PLOS ONE 13(1), doi:10.1371/journal.pone.0191314.
  • Wallach, D., Martre, P., Liu, B., …, Streck, T., …, et al. (2018): Multi-model ensembles improve predictions of crop-environment-management interactions. Glob. Change Biol. 24:5072–5083.

2017

  • Schwientek, M., Rügner, H., Scherer U., Rode M., Grathwohl P. (2017): A parsimonious approach to estimate PAH concentrations in river sediments of anthropogenically impacted watersheds. Science of the Total Environm. 601-602: 636-645, doi:10.1016/j.scitotenv.2017.05.208.
Related papers
  • Seidensticker, S., Zarfl, C., Cirpka, O.A., Fellenberg, G., Grathwohl, P. (2017): Shift in mass transfer of wastewater contaminants from microplastics in presence of dissolved substances. Environ. Sci. Technol. 51(21): 12254-12263.