Dear workshop participants, here you can find the material for our lesson.

antiSMASH

• Official antiSMASH website http://antismash.secondarymetabolites.org
• Workshop antiSMASH site http://workshop.secondarymetabolites.org
  (Please use this site for our workshop exercises, this server is exclusively reserved for our workshop)

Artemis

Artemis is a genome browser and annotation tool developed at the Sanger Centre in Hinxton, UK

• Artemis can be freely downloaded from http://www.sanger.ac.uk/resources/software/artemis/#download
• If you have Java Web start enabled, you can start Artemis without any installation by clicking this link

Analysis of the Streptomyces coelicolor genome (exercise 4.2)

• Link to antiSMASH results for Streptomyces coelicolor

Analysis of the balhimycin biosynthetic gene cluster (exercise 4.3)

• Link to antiSMASH results for balhimycin biosynthetic gene cluster
• antiSMASH results for balhymcin biosynthetic gene cluster as ZIP file

Gene finding with Artemis (exercise 4.4)

• Sequence of the erythromycin biosynthetic gene cluster in FASTA format
• annotated erythromycin biosynthetic gene cluster in EMBL format