Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record Y16952.3:
Cluster 1Nrps-t3pks166669

Cluster 1 - Nrps-t3pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(leu-bht-asn) + (hpg-hpg-bht) + (dhpg) + (tyr) + (pk)
bpsA
NRPSPredictor2 SVM: leu
Stachelhaus code: leu
Minowa: hpg
consensus: leu

NRPSPredictor2 SVM: bht
Stachelhaus code: bht
Minowa: tyr
consensus: bht

NRPSPredictor2 SVM: asn
Stachelhaus code: asn
Minowa: asn
consensus: asn

bpsB
NRPSPredictor2 SVM: hpg
Stachelhaus code: hpg
Minowa: hpg
consensus: hpg

NRPSPredictor2 SVM: hpg
Stachelhaus code: hpg
Minowa: hpg
consensus: hpg

NRPSPredictor2 SVM: bht
Stachelhaus code: bht
Minowa: bht
consensus: bht

bpsC
NRPSPredictor2 SVM: dhpg
Stachelhaus code: dhpg
Minowa: dhpg
consensus: dhpg

bpsD
NRPSPredictor2 SVM: tyr
Stachelhaus code: tyr
Minowa: bht
consensus: tyr

pks
Minowa: AHBA

Database cross-links

Look up in NORINE database

Gene cluster description

Gene Cluster 1. Type = nrps-t3pks. Location: 1 - 66669 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t3pks: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Homologous subclusters