BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 
         (52 letters)

Database: flcdna.txt 
           10,317 sequences; 14,103,301 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT033159                                                              103   3e-023

>BT033159 
          Length = 1501

 Score =  103 bits (52), Expect = 3e-023
 Identities = 52/52 (100%)
 Strand = Plus / Plus

                                                              
Query: 1  cagagagcattcccttgtgcatctcggcctctccttcctcccttcctcgccc 52
          ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9  cagagagcattcccttgtgcatctcggcctctccttcctcccttcctcgccc 60


  Database: flcdna.txt
    Posted date:  Dec 16, 2008 10:41 AM
  Number of letters in database: 14,103,301
  Number of sequences in database:  10,317
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 10317
Number of Hits to DB: 10,730
Number of extensions: 799
Number of successful extensions: 784
Number of sequences better than 1.0e-010: 1
Number of HSP's gapped: 784
Number of HSP's successfully gapped: 1
Length of query: 52
Length of database: 14,103,301
Length adjustment: 15
Effective length of query: 37
Effective length of database: 13,948,546
Effective search space: 516096202
Effective search space used: 516096202
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 11 (22.3 bits)
S2: 32 (63.9 bits)
