Organic chemistry textbooks say that carbon forms up to four bonds, nitrogen up to three, and oxygen only one or two covalent bonds, corresponding to the number of unpaired electrons in the outermost shell. We have studied the bonding of a large number of nitrogen and oxygen atoms incorporated into a carbon matrix (defective graphene) using scanning transmission electron microscopy.
Remarkably, we found that some of the oxygen atoms had three carbon neighbors, among a large variety of other configurations. So far, oxygen with three bonds was only known in a highly charged state, referred to as oxonium, which is difficult to stabilize in extended compounds. Here, however, the oxygen atoms were contained in an extended carbon matrix and showed a remarkable stability by surviving the high dose of high-energy electron irradiation required for their imaging.
The image shows a variety of bonding configurations oxygen and nitrogen atoms in the carbon matrix. The study further revealed that oxygen quite frequently bonds in a “pair” configuration in which two oxygen atoms occupy neighboring sites in the graphene lattice, while not being close enough to form a bond. Individual oxygen and nitrogen atoms tend to occupy edges of small holes, bonded to only two carbon neighbors. While the textbook concept of bonding for carbon, nitrogen and oxygen is thus mostly confirmed, also for the extended material, it appears that these common elements can still yield surprises.
The work was carried out at the University of Vienna and the University of Tübingen by C. Hofer, V. Skakalova, T. Görlich, M. Tripathi, A. Mittelberger, C. Mangler, M. Monazam, T. Susi, J. Kotakoski and J. C. Meyer. The publication in Nature communications can be found at https://www.nature.com/articles/s41467-019-12537-3.