Thema: SeaVis: Seaweed Expression Atlas Visualization Tool for Gene Expression of Algae
BetreuerIn: Kay Nieselt / Susana Coelho / Simon Hackl / Theresa Harbig
Bearbeiterin: Carmen Gil Bredehöft

Thema: Uncertainty estimation of ancient genomic data and their low-dimensional representations
BetreuerIn: Kay Nieselt / Cosimo Posth / Susanne Zabel
Bearbeiter: Samira Breitling

Thema: CLINT: Clinical integrative genomics and transcriptomics analyses with application to breast cancer data from blood
BetreuerIn: Kay Nieselt / Olaf Riess
Bearbeiter: Daniel Giesel

Thema: CLINT: Clinical integrative genomics and transcriptomics analyses with application to COVID-19 data
BetreuerIn: Kay Nieselt / Olaf Riess
Bearbeiter: Sebastian Meyer 

Thema: Improving the reconstruction of very ancient mitochondrial genomes from non-human organisms
BetreuerIn: Kay Nieselt/Cosimo Posth/Mathias Witte Paz
Bearbeiterin: Meret Häusler

Thema: Interpretation of Neural Network Classifiers using Rule-based Models
BetreuerIn: Kay Nieselt/Jan Komorowski
BearbeiterIn: Mark Melzer

Thema: Applied Machine Learning for predicting metal binding sites in proteins
BetreuerIn: Kay Nieselt/Tjeerd Dijkstra/Wolfgang Fuhl/Caroline Jachmann
BearbeiterIn: Gizem Alsahan

Thema: Applying Shneiderman’s mantra to Evidente: Enhance zooming and aggregation for large taxonomic data
BetreuerIn: Kay Nieselt/Daniel Huson/Mathias Witte Paz
BearbeiterIn: Dolores Varga

Thema: Pipeline for the computational prediction of antibody targets
BetreuerIn: Kay Nieselt/Samuel Wagner/Simon Hackl
BearbeiterIn: Majd Hammour

Thema: Comparative modeling of Treponema pallidum variable protein regions
BetreuerIn: K. Nieselt/S. Hackl
BearbeiterIn: Jascha Henseler

Thema: Computational prediction of the 3' end of bacterial transcripts
BetreuerIn: K. Nieselt/C. Wolz
BearbeiterIn: Camill Kaipf

Thema: The OMPeome of Treponema pallidum
BetreuerIn: K. Nieselt
BearbeiterIn: Simon Hackl

Thema: Liver - adipose tissue cross-talk in obesity and Non-alcoholic Fatty Liver Disease (NAFLD) inferred by RNA-Seq data
BetreuerIn: K. Nieselt/M. Claassen
BearbeiterIn: Marvin Döbel

Thema: The manifold insights gained from TSS sequencing data analysed with TSSpredator and other computational methods
BetreuerIn: K. Nieselt/H. Groß
BearbeiterIn: Dilek Tuncbilek-Dere

Thema: From TSS prediction to transcriptome characterization
BetreuerIn: K. Nieselt/H. Groß
BearbeiterIn: Mathias Witte Paz

Thema: PhyloBlast
BetreuerIn: K. Nieselt/F. Götz
BearbeiterIn: Jennifer Müller

Thema: Comparison of expression conservation of orthologs and paralogs
BetreuerIn: K. Nieselt/N. Ziemert
BearbeiterIn: Huang Chin-Hua

Thema: Integrative Transcriptomics- and Proteomics Visualization
BetreuerIn: K. Nieselt/M. Krone
BearbeiterIn: Julian Fratte

Thema: Identification and distribution of Siderophore receptor genes in the bacterial kingdom
BetreuerIn: K. Nieselt/S. Heilbronner
BearbeiterIn: Gordon Armstrong

Thema: Using dRNA-seq to identify a non-clustered glycosyltransferase, essential for the production of brasilicardin A in Nocardia terpenica
BetreuerIn: K. Nieselt/Prof. H. Groß
BearbeiterIn: Tobias Schwarz

Thema: How bitter is Lactococcus lactus? An integrative genomic approach to identify genes of bitterness
BetreuerIn: K. Nieselt/Prof. H. Schmidt (Stuttgart)
BearbeiterIn: Robin Harmening

Thema: Genome architecture-aware mapping using the SuperGenome
BetreuerIn: K. Nieselt/N. Ziemert
BearbeiterIn: Friederike Hanssen

Thema: Visualization approaches for tumor evolution in liquid biopsy data
BetreuerIn: N. Gehlenborg (extern, Medical Harvard)/K. Nieselt
BearbeiterIn: Theresa Harbig

Thema: Representation of ME-models in SBML
BetreuerIn: O. Kohlbacher/K. Nieselt
BearbeiterIn: Marc Alexander Voigt

Thema: Single Cell RNA-seq for Plant Protoplasts
BetreuerIn: M. Timmermans/K. Nieselt
BearbeiterIn: Chong Lu

Thema: Application of NGS to the identification of antibiotic resistant bacteria
BetreuerIn: Prof. K. Musser (Wadsworth Center, Albany, USA)/K. Nieselt
BearbeiterIn: Wolfgang Haas

Thema: Large-scale Pangenomics
BetreuerIn: M. Pop, UMD (extern)/K. Nieselt
BearbeiterIn: Nils Oliver Schliebs

Thema: Integrative characterization of the house dust mite murine asthma model
BetreuerIn: K. Nieselt/Boehringer (extern)
BearbeiterIn: Kevin Menden

Thema: Studying Parasite-Host interaction
BetreuerIn: K. Nieselt/T. Dijkstra
BearbeiterIn: Fabian Mörtter

Thema: Phylogenetic reconstruction of genomes from ancient DNA and modern DNA
BetreuerIn: K. Nieselt/Prof. Fischer (Greifswald)
BearbeiterIn: Veronika Böttcher

Thema: Methods for time-series differential gene expression analysis
BetreuerIn: K. Nieselt/R. Neher
BearbeiterIn: Adrian Geißler

Thema: Metabarcoding workflows for Biodiversity assessment of belowground fungal communities
BetreuerIn: K. Nieselt/N. Ziemert
BearbeiterIn: Max Emil Schön

Thema: TSSpredator 2.0: Improved and enhanced transcription start site prediction
BetreuerIn: K. Nieselt/A. Herbig (J. Krause)
BearbeiterIn: Sven Fillinger

Thema: Evaluation and Extension of PASSAGE – Parallel Sequencing Systems for the Analysis of Gene Expression
BetreuerIn: K. Nieselt/H. Köhler
BearbeiterIn: Lucia Vedder

Thema: Testing framework and improved algorithms for ancient genome reconstruction
BetreuerIn: K.Nieselt/J. Krause
BearbeiterIn: Judith Neukamm

Thema: StreptoExpress – genomewide expression analyses of Streptomyces coelicolor
BetreuerIn: K. Nieselt
BearbeiterIn: Natalya Sabirova

Thema: From the SuperGenome to the Pangenome of Bacteria
BetreuerIn: K. Nieselt/F. Götz
BearbeiterIn: André Hennig

Thema: Bioprocess Data Modelling of Chinese Hamster Ovary Cells
BetreuerIn: K. Nieselt/O. Kohlbacher
BearbeiterIn: Julia Söllner

Thema: Efficient algorithms for Ancient Human Genome Reconstruction
BetreuerIn: K. Nieselt/J. Krause
BearbeiterIn: Alexander Peltzer

Thema: The SuperGenome of Staphylococcus aureus   
BetreuerIn: A. Herbig/K. Nieselt
BearbeiterIn: Linus Backert

Thema: Algorithms for the assembly of ancient genomes
BetreuerIn: K. Nieselt/J. Krause
BearbeiterIn: Volodymyr Piven

Thema: A new very fast mapping algorithm based on sorting
BetreuerIn: K. Nieselt/A. Herbig
BearbeiterIn: Jörg Peter

Thema: Prediction and Systematic Comparison of Non-Coding RNAs in the Bacteria Kingdom
BetreuerIn: A. Herbig/K. Nieselt
BearbeiterIn: Andreas Friedrich

Thema: The history and evolution of SNPs in Yersinia pestis
BetreuerIn: K. Nieselt/J. Krause
BearbeiterIn: Philip Stevens

Thema: Statistics with confidence in comparative metagenomics
BetreuerIn: K. Nieselt/D. Huson
BearbeiterIn: Max Schubach

Thema: Metagenomic Pathway Analysis
BetreuerIn: K. Nieselt/D. Huson
BearbeiterIn: Tim Scheurenbrand

Thema: A dynamic model of metabolism in Enterococcus faecalis
BetreuerIn: K. Nieselt/Prof. P. Wills (NZ)
BearbeiterIn: Markus List

Thema: 3D-Visualization Analytics for Transcriptomic Data
BetreuerIn: K. Nieselt/Prof. G. Scheuermann
BearbeiterIn: Günter Jäger

Thema: Automated Extraction of Variation Mentionas from Literature Sources and Mapping to a unique Database Identifier
BetreuerIn: K. Nieselt/Prof. P. M. Hofmann-Apitius
BearbeiterIn: Philippe Thomas

Thema: Predition of tissue specific enhancers in Caenorhabditis elegans
BetreuerIn: K. Nieselt/R. Sommer/C. Dieterich
BearbeiterIn: Philipp Drewe