With GPA (Genome Profile Alignment), we provide an user-friendly tool for researchers to compute large-scale whole-genome alignments.

Using GPA

The GPA is available on GitHub, accompanied by a hands-on example.

Citation

If you use GPA, please cite:

Hennig A, Nieselt K.
Efficient merging of genome profile alignments
Bioinformatics 2019, 35(14):i71-i80 (doi.org/10.1093/bioinformatics/btz377)

Contact

For questions and bug reports, see the GitHub website. Ideally, you could open an issue ticket on GitHub in the corresponding project, as you will get updates on when bugs are fixed then, too.