Susanne Zabel

Interfaculty Institute for Bioinformatics and Medical Informatics (IBMI)
Faculty of Science, University of Tübingen
Sand 14
D-72076 Tübingen
Phone: +49-7071-29 70448
E-mail: susanne.zabel[at]uni-tuebingen.de

Research topics

Uncertainty in Dimensionality Reduction
- VIPurPCA: Visualizing and Propagating Uncertainty in Principal Component Analysis
- Missing data in ancient genotype representations and their effect on the PCA embedding (in progress)
- Uncertainty analysis for t-SNE (in progress)
Phylogeny & Taxonomy
- BLASTphylo: An Interactive Web Tool for Taxonomic and Phylogenetic Analysis of Prokaryotic Genes
- Methods for taxonomic classification, e.g. Improving taxonomic classification with feature space balancing
Tübingen AI training centrum for medicine
- Development and implementation of a AI curriculum for medicine and medicine related life sciences students (Project homepage)

Short Biography

since 2022: Research Assistant University of Tübingen, funded by TüKITZMed
2018 - 2022: Research Assistant University of Tübingen, funded by the Cluster of Excellence – Machine Learning for Science
2015 - 2018: Bioinformatics M.Sc. University of Tübingen
2011 - 2014: Biochemistry B.Sc. University of Tübingen

Teaching Assistance

Winter 23/24	Expression Bioinformatics
Summer 22	Practical Transcriptomics
Winter 21/22	Seminar Bioinformatics and Machine Learning
Summer 21	Teamprojekt "Didaktische step-by-step Visualisierung von distanzbasierten Phylogeniemethoden"
Winter 20/21	Expression Bioinformatics
Summer 20	Teamprojekt "Entwicklung eines Phylogenie Spiels"
Winter 19/20	Sequence Bioinformatics
Summer 19	Grundlagen der Bioinformatik & Practical Transcriptomics
Winter 18/19	Microarray

Publications

see here for Google scholar profile