Susanne Zabel
Interfaculty Institute for Bioinformatics and Medical Informatics (IBMI)
Faculty of Science, University of Tübingen
Sand 14
D-72076 Tübingen
Phone: +49-7071-29 70448
E-mail: susanne.zabel[at]uni-tuebingen.de
Research topics
- Uncertainty in Dimensionality Reduction
- VIPurPCA: Visualizing and Propagating Uncertainty in Principal Component Analysis
- Missing data in ancient genotype representations and their effect on the PCA embedding (in progress)
- Uncertainty analysis for t-SNE (in progress)
- Phylogeny & Taxonomy
- BLASTphylo: An Interactive Web Tool for Taxonomic and Phylogenetic Analysis of Prokaryotic Genes
- Methods for taxonomic classification, e.g. Improving taxonomic classification with feature space balancing
- Tübingen AI training centrum for medicine
- Development and implementation of a AI curriculum for medicine and medicine related life sciences students (Project homepage)
Short Biography
- since 2022: Research Assistant University of Tübingen, funded by TüKITZMed
- 2018 - 2022: Research Assistant University of Tübingen, funded by the Cluster of Excellence – Machine Learning for Science
- 2015 - 2018: Bioinformatics M.Sc. University of Tübingen
- 2011 - 2014: Biochemistry B.Sc. University of Tübingen
Teaching Assistance
| Winter 23/24 | Expression Bioinformatics |
| Summer 22 | Practical Transcriptomics |
| Winter 21/22 | Seminar Bioinformatics and Machine Learning |
| Summer 21 | Teamprojekt "Didaktische step-by-step Visualisierung von distanzbasierten Phylogeniemethoden" |
| Winter 20/21 | Expression Bioinformatics |
| Summer 20 | Teamprojekt "Entwicklung eines Phylogenie Spiels" |
| Winter 19/20 | Sequence Bioinformatics |
| Summer 19 | Grundlagen der Bioinformatik & Practical Transcriptomics |
| Winter 18/19 | Microarray |
Publications
see here for Google scholar profile