Mathias Witte Paz
PhD Student
Integrative Transcriptomics
Interfaculty Institute for Bioinformatics and Medical Informatics (IBMI)
Sand 14
72076 Tübingen
+49 (0)7071 – 29-70447
mathias-alexander.witte-paz[at]uni-tuebingen.de
Research topics
- Analysis of bacterial communities
- Homology analysis for the siderophore intake potential in Corynebacteria
- Development of visual analytics tools for biological data:
- Evidente: A SNP-based phylogenetic tree Visual Analytics Tool (https://tuevis.cs.uni-tuebingen.de/evidente/)
- Part of the TueVis Project: development of tools for the analysis of omics data (https://tuevis.cs.uni-tuebingen.de/)
- Architecture of the prokaryotic transcriptome
- Development of a web-platform for the identification of transcription start sites (TSSs) using TSSpredator-Web (https://tuevis.cs.uni-tuebingen.de/tsspredator-web/)
- TSS-captur (https://tuevis.cs.uni-tuebingen.de/tss-captur/): Characterization of unannotated regions of prokaryotes based on transcriptomic data
Short Biography
- since 2021, Research Assistant at the University of Tübingen, funded by the Cluster of Excellence – Controlling Microbes to Fight Infections
- 2018 - 2021, MSc. Bioinformatics, University of Tübingen
- 2015 - 2018 BSc. Medical Informatics, University of Tübingen
Teaching Assistance
| Summer 24 | Team Project “Predicting, Comparing and Visualizing Transcription Start Sites” |
| Summer 23 | Grundlagen der Bioinformatik & Practical Course: Bioinformatics Methods and Visual Analytics of Biological Data |
| Winter 22/23 | Proseminar: Grundlagen der Bioinformatik |
| Summer 22 | Grundlagen der Bioinformatik |
| Winter 21/22 | Expression Bioinformatics |
| Winter 20/21 | Expression Bioinformatics |
| Winter 19/20 | Visualization of Biological Data (Group Big Data Visual Analytics) |
| Summer 19 | Grundlagen der Bioinformatik |
Publications
see here for Google scholar profile